Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LINGO2Leucine rich repeat and Ig domain containing 2. (606 aa)    
Predicted Functional Partners:
NGFR
Nerve growth factor receptor.
    
 0.847
CASTOR2
Uncharacterized protein.
      
 0.764
LINGO1
Leucine rich repeat and Ig domain containing 1.
   
   0.743
OMG
Oligodendrocyte myelin glycoprotein.
   
 0.734
UBASH3B
Ubiquitin associated and SH3 domain containing B.
      
 0.730
ACTR3B
Uncharacterized protein; Belongs to the actin family.
    
 
 0.723
PDLIM5
PDZ and LIM domain 5.
     
 0.712
LGALSL
Galectin.
   
  
 0.670
MRS2
Magnesium transporter.
      
 0.669
DPP6
Dipeptidyl peptidase like 6; Belongs to the peptidase S9B family.
   
  
 0.636
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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