STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMCH1LIM and calponin homology domains 1. (1529 aa)    
Predicted Functional Partners:
ZNF445
Zinc finger protein 445.
    
 
 0.726
EPS8L2
EPS8 like 2.
   
 
 0.629
TMEM69
Transmembrane protein 69.
      
 0.613
ZFP28
ZFP28 zinc finger protein.
    
 
 0.609
PHOX2B
Paired like homeobox 2B.
   
  
 0.606
ZNF827
Zinc finger protein 827.
    
 
 0.586
SHISA3
Shisa family member 3.
   
  
 0.569
GAS2L2
Growth arrest specific 2 like 2.
   
 
 0.561
SIPA1L2
Signal induced proliferation associated 1 like 2.
   
  
 0.560
CDH24
Cadherin 24; Cadherins are calcium-dependent cell adhesion proteins.
   
 
 0.559
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.