STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEDAGMesenteric estrogen dependent adipogenesis. (306 aa)    
Predicted Functional Partners:
OPN5
Opsin 5; Belongs to the G-protein coupled receptor 1 family.
      
 0.738
ZC2HC1C
Zinc finger C2HC-type containing 1C.
      
 0.641
PRDM5
Zinc finger protein.
      
 0.624
B3GLCT
Beta 3-glucosyltransferase.
      
 0.615
PAMR1
Peptidase domain containing associated with muscle regeneration 1; Belongs to the peptidase S1 family.
   
  
 0.600
ALOX5AP
Arachidonate 5-lipoxygenase activating protein.
      
 0.550
DGKI
Diacylglycerol kinase.
      
 0.549
SLC7A14
Solute carrier family 7 member 14.
      
 0.539
PDZD2
PDZ domain containing 2.
      
 0.506
BMPER
BMP binding endothelial regulator.
      
 0.504
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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