STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD1LChromodomain helicase DNA binding protein 1 like. (900 aa)    
Predicted Functional Partners:
XPA
XPA, DNA damage recognition and repair factor.
    
 0.930
PARP1
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
   
 0.844
LOC101085685
Uncharacterized protein.
   
 0.790
LOC101085685-2
XPGI domain-containing protein.
   
 0.790
ENSFCAP00000055026
XPGN domain-containing protein.
   
 0.790
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
    
 0.785
PARP2
Poly [ADP-ribose] polymerase.
   
 0.740
BPTF
Bromodomain PHD finger transcription factor.
   
 
 0.732
DDB2
Damage specific DNA binding protein 2.
   
 0.716
XRCC1
X-ray repair cross complementing 1.
    
 0.705
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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