STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C6orf58Chromosome 6 open reading frame 58. (328 aa)    
Predicted Functional Partners:
HOGA1
4-hydroxy-2-oxoglutarate aldolase 1; Belongs to the DapA family.
   
  
 0.726
CFAP61
Cilia and flagella associated protein 61.
      
 0.722
ATP6V1FNB
ATP6V1F neighbor.
      
 0.722
CCDC127
Coiled-coil domain containing 127.
      
 0.722
CST11
Cystatin 11.
   
  
 0.648
FSIP2
Fibrous sheath interacting protein 2.
      
 0.610
GCAT
Glycine C-acetyltransferase.
      
 0.607
TMED1
Transmembrane p24 trafficking protein 1.
      
 0.598
DOK2
Docking protein 2.
      
 0.593
MMACHC
Metabolism of cobalamin associated C.
   
  
 0.577
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.