STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101089387Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (456 aa)    
Predicted Functional Partners:
LOC101090040
5-hydroxytryptamine receptor 3C; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
  
0.918
HTR3A
5-hydroxytryptamine receptor 3A; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
0.865
HTR3B
5-hydroxytryptamine receptor 3B; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
0.689
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
   
 
 0.627
GRIN2B
Glutamate ionotropic receptor NMDA type subunit 2B.
     
 0.608
SLITRK1
SLIT and NTRK like family member 1.
      
 0.577
HTR7
5-hydroxytryptamine receptor 7; Belongs to the G-protein coupled receptor 1 family.
      
 0.501
WDR87
WD repeat domain 87.
  
 
   0.473
RIC3
RIC3 acetylcholine receptor chaperone.
    
 
 0.461
SFTA2
Surfactant associated 2.
   
  
 0.458
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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