STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MADCAM1Mucosal vascular addressin cell adhesion molecule 1. (380 aa)    
Predicted Functional Partners:
ITGA4
Integrin subunit alpha 4; Belongs to the integrin alpha chain family.
    
 0.986
SELL
Selectin L.
    
 0.984
ITGB7
Integrin beta; Belongs to the integrin beta chain family.
    
 0.982
OPN1LW
Long-wave-sensitive opsin 1; Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to cis-retinal.
   
    0.791
SF3B6
Splicing factor 3b subunit 6.
   
    0.791
CCR10
C-C motif chemokine receptor 10; Belongs to the G-protein coupled receptor 1 family.
      
 0.670
SELP
Selectin P.
    
 0.665
SELE
Selectin E.
    
 0.642
CCL21
C-C motif chemokine ligand 21.
   
  
 0.602
CCR9
C-C motif chemokine receptor 9; Belongs to the G-protein coupled receptor 1 family.
      
 0.532
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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