STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H8Zinc finger CCCH-type containing 8. (311 aa)    
Predicted Functional Partners:
ICE2
Interactor of little elongation complex ELL subunit 2.
     
 0.972
ICE1
Interactor of little elongation complex ELL subunit 1.
   
 
 0.929
ELL
Elongation factor for RNA polymerase II.
     
 0.802
NABP2
Nucleic acid binding protein 2.
     
 0.786
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.780
SYMPK
Symplekin.
   
 0.776
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.774
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.773
FIP1L1
Factor interacting with PAPOLA and CPSF1.
    
 0.770
CSTF3
Cleavage stimulation factor subunit 3.
   
 0.765
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.