STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF1H1orf112Chromosome F1 C1orf112 homolog. (912 aa)    
Predicted Functional Partners:
ZFYVE28
Zinc finger FYVE-type containing 28.
      
 0.708
CABIN1
Calcineurin binding protein 1.
      
 0.671
CCDC181
Coiled-coil domain containing 181.
      
 0.665
METTL18
Methyltransferase like 18.
      
 0.624
MCM8
Minichromosome maintenance 8 homologous recombination repair factor; Belongs to the MCM family.
   
  
 0.609
SLC9A5
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
      
 0.606
EXO1
Exonuclease 1.
   
  
 0.544
KNTC1
Kinetochore associated 1.
   
  
 0.536
KIFAP3
Kinesin associated protein 3.
      
 0.526
BLZF1
Basic leucine zipper nuclear factor 1.
      
 0.525
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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