STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC46A3Solute carrier family 46 member 3. (461 aa)    
Predicted Functional Partners:
CPPED1
Calcineurin like phosphoesterase domain containing 1.
   
  
 0.600
SIDT2
Transgelin; Belongs to the calponin family.
      
 0.471
RNF213
Ring finger protein 213.
      
 0.455
NFX1
Nuclear transcription factor, X-box binding 1.
      
 0.455
PITRM1
Pitrilysin metallopeptidase 1.
      
 0.455
LOC111559039
M16C_associated domain-containing protein.
      
 0.455
BTAF1
B-TFIID TATA-box binding protein associated factor 1.
      
 0.452
SLC16A3
Solute carrier family 16 member 3.
   
  
 0.444
GMFB
Glia maturation factor; Belongs to the actin-binding proteins ADF family. GMF subfamily.
      
 0.420
GMFG
Glia maturation factor gamma.
      
 0.420
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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