STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXL16F-box and leucine rich repeat protein 16. (483 aa)    
Predicted Functional Partners:
FBXO16
F-box protein 16.
    
 0.813
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.792
ENSFCAP00000055272
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.777
SKP1
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.777
RBX1
Ring-box 1.
    
 0.679
FBXO2
F-box protein 2.
   
 
 0.662
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.629
COMMD4
COMM domain containing 4.
   
 0.618
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.617
CAND2
Cullin associated and neddylation dissociated 2 (putative).
    
 0.614
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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