STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRGAP3SLIT-ROBO Rho GTPase activating protein 3. (1099 aa)    
Predicted Functional Partners:
CDC42-2
Uncharacterized protein.
   
 0.942
ROBO1
Roundabout guidance receptor 1.
    
 0.926
SRGAP1
SLIT-ROBO Rho GTPase activating protein 1.
  
 
 
0.917
SRGAP2
Uncharacterized protein.
  
 
 
0.917
ITSN2
Intersectin 2.
   
0.818
USP33
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
      
 0.753
ATP5F1A
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
      
 0.708
ITSN1
Intersectin 1.
   
0.705
CARMIL3
Capping protein regulator and myosin 1 linker 3.
    
 0.633
WASL
WASP like actin nucleation promoting factor.
   
 0.620
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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