STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELAC2ElaC ribonuclease Z 2. (820 aa)    
Predicted Functional Partners:
ELAC1
ElaC ribonuclease Z 1.
     
0.916
EXOG
Exo/endonuclease G.
   
   0.821
ENDOG
Endonuclease.
   
   0.821
TRMT61A
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
  
  
 0.767
SUPV3L1
Suv3 like RNA helicase.
   
  
 0.735
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
    
 
 0.704
MRM1
Mitochondrial rRNA methyltransferase 1.
  
 
 0.687
TRMT10C
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
 
 0.685
PWP2
Uncharacterized protein.
   
    0.676
INTS9
Integrator complex subunit 9.
     
 0.671
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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