STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB38RAB38, member RAS oncogene family. (211 aa)    
Predicted Functional Partners:
CHM
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
    
 0.871
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.805
ANKRD27
Ankyrin repeat domain 27.
    
 
 0.786
GAK
Cyclin G associated kinase.
    
 
 0.724
HPS1
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.
    
 0.724
OCA2
OCA2 melanosomal transmembrane protein.
      
 0.723
HPS4
HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.
    
 0.696
HPS3
Hermansky-Pudlak syndrome 3 protein homolog; Involved in early stages of melanosome biogenesis and maturation.
    
 
 0.658
TYRP1
Uncharacterized protein.
    
 
 0.628
SLC45A2
Solute carrier family 45 member 2.
      
 0.627
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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