STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMZ1Archaelysin family metallopeptidase 1. (493 aa)    
Predicted Functional Partners:
RAPGEFL1
Rap guanine nucleotide exchange factor like 1.
      
 0.519
SDR16C5
Short chain dehydrogenase/reductase family 16C member 5; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.489
CCDC71
Coiled-coil domain containing 71.
      
 0.485
CDADC1
Cytidine and dCMP deaminase domain containing 1.
      
 0.455
PRORP
Protein only RNase P catalytic subunit.
      
 0.442
SMTNL2
Smoothelin like 2.
      
 0.437
EML1
EMAP like 1.
      
 0.414
SDK2
Sidekick cell adhesion molecule 2.
      
 0.410
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.