STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGFOD12-oxoglutarate and iron dependent oxygenase domain containing 1. (545 aa)    
Predicted Functional Partners:
CAPRIN1
Cell cycle associated protein 1.
      
 0.732
HERPUD2
HERPUD family member 2.
      
 0.730
SYCP3
Synaptonemal complex protein 3.
   
 
 0.676
LOC111558739
Cor1 domain-containing protein.
   
 
 0.676
LOC105260238
Cor1 domain-containing protein.
   
 
 0.676
ATXN2
Ataxin 2.
      
 0.674
G3BP1
G3BP stress granule assembly factor 1.
   
  
 0.651
CPOX
Uncharacterized protein.
   
  
 0.586
NLRC5
NLR family CARD domain containing 5.
      
 0.577
TSR1
TSR1 ribosome maturation factor.
   
    0.549
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.