STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CE2H16orf70Chromosome E2 C16orf70 homolog. (422 aa)    
Predicted Functional Partners:
BCAS3
BCAS3 microtubule associated cell migration factor.
   
 
 0.921
WDR45B
WD repeat domain 45B.
   
  
 0.773
PRAF2
WD repeat domain 45.
   
  
 0.739
ZFYVE1
Zinc finger FYVE-type containing 1.
   
  
 0.708
WHAMM
WASP homolog associated with actin, golgi membranes and microtubules.
    
 
 0.667
ATG2A
Autophagy related 2A.
      
 0.624
PLET1
Uncharacterized protein.
      
 0.615
SAR1B
Secretion associated Ras related GTPase 1B; Belongs to the small GTPase superfamily. SAR1 family.
      
 0.614
RAD21L1
RAD21 cohesin complex component like 1.
 
      0.611
PEF1
Penta-EF-hand domain containing 1.
      
 0.603
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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