STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA5BCarbonic anhydrase 5B. (464 aa)    
Predicted Functional Partners:
SRSF2
RRM domain-containing protein.
   
 0.915
BLACAT1
Bladder cancer associated transcript 1.
   
 0.874
SRSF1
Uncharacterized protein.
   
 0.847
SRSF7
Serine and arginine rich splicing factor 7.
   
 0.766
ENSFCAP00000030387
RRM domain-containing protein.
   
 0.766
SNRNP48
Small nuclear ribonucleoprotein U11/U12 subunit 48.
   
 
 0.735
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
   
 0.695
POLR2K
Uncharacterized protein.
     
 0.638
ENSFCAP00000058404
Uncharacterized protein.
     
 0.638
RNPC3
RNA binding region (RNP1, RRM) containing 3.
   
 
 0.631
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.