STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAVER1Uncharacterized protein. (758 aa)    
Predicted Functional Partners:
VCL
Vinculin.
    
 
 0.896
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 0.813
EFHB
EF-hand domain family member B.
   
  
 0.681
CHERP
Calcium homeostasis endoplasmic reticulum protein.
   
  
 0.679
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.679
RCE1
Ras converting CAAX endopeptidase 1.
      
 0.666
HNRNPA1
Uncharacterized protein.
   
 0.656
DUSP27
Dual specificity phosphatase 27, atypical; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
      
 0.637
LRFN4
Leucine rich repeat and fibronectin type III domain containing 4.
      
 0.633
SRSF5
Serine and arginine rich splicing factor 5.
   
 0.613
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.