Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSBP4Single stranded DNA binding protein 4. (395 aa)    
Predicted Functional Partners:
LDB2
LIM domain binding 2.
   
 
 0.677
LDB1
LIM domain binding 1.
   
 
 0.677
LHX9
LIM homeobox 9.
    
 
 0.652
LHX4
LIM homeobox 4.
    
 
 0.638
LMO4
LIM domain only 4.
    
 
 0.609
LHX3
LIM homeobox 3.
    
 
 0.585
LHX1
LIM homeobox 1.
    
 
 0.544
LMO1
LIM domain only 1.
    
 
 0.520
LMO3
LIM domain only 3.
    
 
 0.520
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 
 0.503
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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