STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTBDNRetbindin. (223 aa)    
Predicted Functional Partners:
GUCY1A2
Guanylate cyclase 1 soluble subunit alpha 2; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
      
 0.734
RAD18
RAD18 E3 ubiquitin protein ligase.
      
 0.712
OPTC
Opticin.
      
 0.687
KCNB1
Potassium voltage-gated channel subfamily B member 1; Belongs to the potassium channel family.
      
 0.662
BEST2
Bestrophin; Forms calcium-sensitive chloride channels. Permeable to bicarbonate; Belongs to the bestrophin family.
      
 0.659
FANCL
FA complementation group L.
      
 0.621
RAD17
RAD17 checkpoint clamp loader component.
      
 0.614
AQP4
Aquaporin 4; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.587
GUCA2B
Guanylate cyclase activator 2B.
      
 0.551
NEO1
Neogenin 1.
      
 0.545
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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