STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEST4Bestrophin; Forms calcium-sensitive chloride channels. Permeable to bicarbonate; Belongs to the bestrophin family. (473 aa)    
Predicted Functional Partners:
DEPDC1
DEP domain containing 1.
      
 0.695
RPE65
Retinoid isomerohydrolase RPE65.
      
 0.695
LRAT
Lecithin retinol acyltransferase.
      
 0.613
PELO
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
 
      0.546
RLBP1
Retinaldehyde binding protein 1.
   
  
 0.531
GLUL
Glutamine synthetase.
    
 
 0.527
CD1H11orf86
Chromosome 11 open reading frame 86.
      
 0.491
LRRC8A
Leucine rich repeat containing 8 VRAC subunit A.
      
 0.481
NPHP3
TPR_REGION domain-containing protein.
    
 
 0.458
RPGR
Uncharacterized protein.
      
 0.455
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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