STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX29Sorting nexin 29. (790 aa)    
Predicted Functional Partners:
TXNDC11
Thioredoxin domain containing 11.
      
 0.696
ZMAT5
Zinc finger matrin-type 5.
      
 0.679
TAFA1
TAFA chemokine like family member 1.
   
  
 0.648
GDE1
Glycerophosphodiester phosphodiesterase 1.
      
 0.644
SYTL3
Synaptotagmin like 3.
      
 0.642
FAM110A
Family with sequence similarity 110 member A.
      
 0.630
CLEC16A
C-type lectin domain containing 16A.
   
  
 0.596
VPS37A
VPS37A subunit of ESCRT-I.
      
 0.590
KCNK2
Potassium two pore domain channel subfamily K member 2; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.587
SAMD8
Sterile alpha motif domain containing 8.
      
 0.540
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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