STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCNKAChloride channel protein. (687 aa)    
Predicted Functional Partners:
BSND
Barttin CLCNK type accessory beta subunit.
   
 
 0.964
KCNH8
Potassium voltage-gated channel subfamily H member 8.
   
  
 0.673
TMC5
Transmembrane channel-like protein.
    
 
 0.650
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
   
 0.641
CLIC1
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
      
 0.598
LOC101097782
Uncharacterized protein.
      
 0.564
LOC101100421
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
   
  
 0.555
PRODH2
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
   
  
 0.522
CNGA1
Cyclic nucleotide gated channel subunit alpha 1.
    
 
 0.521
CLIC4
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
      
 0.515
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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