GPR156 protein (Felis catus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GPR156

G protein-coupled receptor 156. (809 aa)

Predicted Functional Partners:

GABBR2

0.906

GPR18

0.786

GPRC5D

0.781

GPR158

0.765

GPRC5B

0.750

MDGA2

0.705

GPRC5C

0.674

PRM3

0.672

TNP2

0.668

GPRC6A

0.666

Your Current Organism:

Felis catus

NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GABBR2	GPR156	ENSFCAP00000008183	ENSFCAP00000009537	Gamma-aminobutyric acid type B receptor subunit 2.	G protein-coupled receptor 156.	0.906
GPR156	GABBR2	ENSFCAP00000009537	ENSFCAP00000008183	G protein-coupled receptor 156.	Gamma-aminobutyric acid type B receptor subunit 2.	0.906
GPR156	GPR158	ENSFCAP00000009537	ENSFCAP00000027755	G protein-coupled receptor 156.	G protein-coupled receptor 158.	0.765
GPR156	GPR18	ENSFCAP00000009537	ENSFCAP00000023028	G protein-coupled receptor 156.	G protein-coupled receptor 18.	0.786
GPR156	GPRC5B	ENSFCAP00000009537	ENSFCAP00000029694	G protein-coupled receptor 156.	G protein-coupled receptor class C group 5 member B.	0.750
GPR156	GPRC5C	ENSFCAP00000009537	ENSFCAP00000045373	G protein-coupled receptor 156.	G protein-coupled receptor class C group 5 member C.	0.674
GPR156	GPRC5D	ENSFCAP00000009537	ENSFCAP00000012975	G protein-coupled receptor 156.	G protein-coupled receptor class C group 5 member D.	0.781
GPR156	GPRC6A	ENSFCAP00000009537	ENSFCAP00000050459	G protein-coupled receptor 156.	G protein-coupled receptor class C group 6 member A.	0.666
GPR156	MDGA2	ENSFCAP00000009537	ENSFCAP00000022764	G protein-coupled receptor 156.	MAM domain containing glycosylphosphatidylinositol anchor 2.	0.705
GPR156	PRM3	ENSFCAP00000009537	ENSFCAP00000046312	G protein-coupled receptor 156.	Protamine 3.	0.672
GPR156	TNP2	ENSFCAP00000009537	ENSFCAP00000003323	G protein-coupled receptor 156.	Nuclear transition protein 2; Plays a key role in the replacement of histones to protamine in the elongating spermatids of mammals. In condensing spermatids, loaded onto the nucleosomes, where it promotes the recruitment and processing of protamines, which are responsible for histone eviction.	0.668
GPR158	GPR156	ENSFCAP00000027755	ENSFCAP00000009537	G protein-coupled receptor 158.	G protein-coupled receptor 156.	0.765
GPR158	GPR18	ENSFCAP00000027755	ENSFCAP00000023028	G protein-coupled receptor 158.	G protein-coupled receptor 18.	0.455
GPR158	GPRC5B	ENSFCAP00000027755	ENSFCAP00000029694	G protein-coupled receptor 158.	G protein-coupled receptor class C group 5 member B.	0.677
GPR158	GPRC5C	ENSFCAP00000027755	ENSFCAP00000045373	G protein-coupled receptor 158.	G protein-coupled receptor class C group 5 member C.	0.537
GPR158	GPRC5D	ENSFCAP00000027755	ENSFCAP00000012975	G protein-coupled receptor 158.	G protein-coupled receptor class C group 5 member D.	0.640
GPR158	GPRC6A	ENSFCAP00000027755	ENSFCAP00000050459	G protein-coupled receptor 158.	G protein-coupled receptor class C group 6 member A.	0.594
GPR18	GPR156	ENSFCAP00000023028	ENSFCAP00000009537	G protein-coupled receptor 18.	G protein-coupled receptor 156.	0.786
GPR18	GPR158	ENSFCAP00000023028	ENSFCAP00000027755	G protein-coupled receptor 18.	G protein-coupled receptor 158.	0.455
GPRC5B	GPR156	ENSFCAP00000029694	ENSFCAP00000009537	G protein-coupled receptor class C group 5 member B.	G protein-coupled receptor 156.	0.750