STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTPBP6GTP binding protein 6 (putative). (525 aa)    
Predicted Functional Partners:
MRPL32
Mitochondrial ribosomal protein L32.
    
 
 0.852
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.830
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.819
MRPL21
Mitochondrial ribosomal protein L21.
   
   0.814
MRPL20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
    
   0.809
MRPL17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
    
   0.809
MRPL9
Mitochondrial ribosomal protein L9.
   
 
 0.771
RPL23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.722
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
    
 
 0.696
TRIT1
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.
  
  
 0.673
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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