STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPUSD1RNA pseudouridine synthase domain containing 1. (327 aa)    
Predicted Functional Partners:
PUS7L
Pseudouridine synthase 7 like.
    
 
 0.818
PUS7
Pseudouridine synthase 7.
    
 
 0.728
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
  
 
 0.694
GTPBP3
GTP binding protein 3, mitochondrial.
  
 
 0.690
PUS1
Pseudouridine synthase 1.
  
  
 0.689
TRUB2
TruB pseudouridine synthase family member 2.
  
 
 0.677
PUS3
Pseudouridine synthase 3.
  
  
 0.676
RPUSD3
RNA pseudouridine synthase D3.
      
 0.654
MRM3
Mitochondrial rRNA methyltransferase 3.
  
 
 0.649
GTPBP8
GTP binding protein 8 (putative).
   
 
 0.633
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.