STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRRM4Serine/arginine repetitive matrix 4. (625 aa)    
Predicted Functional Partners:
MEX3B
Mex-3 RNA binding family member B.
    
 0.784
CMTR1
Cap methyltransferase 1.
      
 0.672
CELF3
CUGBP Elav-like family member 3.
   
  
 0.628
CELF4
CUGBP Elav-like family member 4.
   
  
 0.628
SFSWAP
Splicing factor SWAP.
      
 0.625
LRRC23
Leucine rich repeat containing 23.
    
 0.610
PTBP1
Polypyrimidine tract binding protein 1.
      
 0.595
SRRM3
Serine/arginine repetitive matrix 3.
   
  
0.586
IGSF11
Immunoglobulin superfamily member 11.
      
 0.578
MNT
MAX network transcriptional repressor.
      
 0.578
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.