STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAI1Snail family transcriptional repressor 1. (264 aa)    
Predicted Functional Partners:
KPNB1
Karyopherin subunit beta 1.
    
   0.810
KDM1A
Lysine demethylase 1A.
    
 0.785
ZEB1
Zinc finger E-box binding homeobox 1.
      
0.743
VIM
Vimentin; Belongs to the intermediate filament family.
      
 0.741
CDH1
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.736
RCOR1
REST corepressor 1.
    
 0.731
SMAD3
Mothers against decapentaplegic homolog.
   
 
 0.713
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 
 0.704
TWIST1
Twist family bHLH transcription factor 1.
   
  
 0.691
TBXT
T-box transcription factor T.
    
 0.689
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.