Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
MEPCEMethylphosphate capping enzyme. (689 aa)    
Predicted Functional Partners:
LARP7
La ribonucleoprotein domain family member 7.
   
 
 0.993
CDK9
Cyclin dependent kinase 9; Belongs to the protein kinase superfamily.
    
 
 0.981
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
    
 
 0.969
HEXIM2
HEXIM P-TEFb complex subunit 2.
    
 
 0.928
PRPF3
Pre-mRNA processing factor 3.
    
   0.927
HEXIM1
HEXIM P-TEFb complex subunit 1.
    
 
 0.922
PRPF4
Pre-mRNA processing factor 4.
   
   0.906
CCNT1
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 
 0.889
PRPF31
Pre-mRNA processing factor 31.
    
 
 0.837
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
   0.828
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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