Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NID1Nidogen 1. (1244 aa)    
Predicted Functional Partners:
LAMC1
Laminin subunit gamma 1.
   
 0.985
NID2
Nidogen 2.
   
 0.977
HSPG2
Heparan sulfate proteoglycan 2.
   
 0.973
LAMB3
Laminin subunit beta 3.
   
 0.869
LAMA4
Laminin subunit alpha 4.
   
 0.858
FBLN1
Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.
   
 0.841
LAMA3
Laminin subunit alpha 3.
   
 0.830
LAMC3
Laminin subunit gamma 3.
   
 0.796
MMP19
Matrix metallopeptidase 19.
   
 
 0.787
TNFAIP6
TNF alpha induced protein 6.
     
 0.785
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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