STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM6SF1Transmembrane 6 superfamily member 1. (370 aa)    
Predicted Functional Partners:
TMEM182
Transmembrane protein 182.
      
 0.935
CDH15
Cadherin 15; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.811
TSPAN33
Tetraspanin.
      
 0.751
EBPL
EBP like.
      
 0.541
LONRF1
LON peptidase N-terminal domain and ring finger 1.
      
 0.489
NAP1L3
Nucleosome assembly protein 1 like 3; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.485
SIAE
Sialic acid acetylesterase.
      
 0.483
PNPLA7
Patatin like phospholipase domain containing 7.
      
 0.481
HPSE
Heparanase.
      
 0.467
DNASE2
Deoxyribonuclease 2, lysosomal.
      
 0.455
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.