STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC10Homeobox C10. (342 aa)    
Predicted Functional Partners:
HOXC9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
   
 
0.825
TBX4
T-box transcription factor 4.
    
 
 0.662
TIGD4
Tigger transposable element derived 4.
      
 0.648
TAFA4
TAFA chemokine like family member 4.
      
 0.581
TMEM26
Transmembrane protein 26.
      
 0.577
HOXC6
Homeobox C6.
   
 
0.538
HOXC4
Homeobox C4.
   
 
0.520
NRIP1
Nuclear receptor interacting protein 1.
      
 0.501
HOXB7
Homeobox B7.
   
 
0.499
CIDEA
Cell death inducing DFFA like effector a.
      
 0.499
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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