STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRERF1Transcriptional regulating factor 1. (1187 aa)    
Predicted Functional Partners:
DNTTIP1
Deoxynucleotidyltransferase terminal interacting protein 1.
    
 
 0.869
ZBTB42
Uncharacterized protein.
    
 
 0.795
ELMSAN1
ELM2 and Myb/SANT domain containing 1.
    
 
0.650
KCTD19
Potassium channel tetramerization domain containing 19.
      
 0.638
CHST2
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.611
RBFOX2
RNA binding fox-1 homolog 2.
      
 0.589
RAPGEF3
Rap guanine nucleotide exchange factor 3.
      
 0.525
THAP5
THAP domain containing 5.
  
 
   0.493
EID2
EP300 interacting inhibitor of differentiation 2.
      
 0.455
VAV3
Vav guanine nucleotide exchange factor 3.
      
 0.452
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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