STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101093982Coronin; Belongs to the WD repeat coronin family. (959 aa)    
Predicted Functional Partners:
PAM16
Presequence translocase associated motor 16.
 
      0.892
RNF166
Ring finger protein 166.
      
 0.788
KLHL28
Kelch like family member 28.
    
 
 0.762
KLHL20
BTB domain-containing protein.
    
 
 0.654
LOC111559174
BTB domain-containing protein.
    
 
 0.654
KBTBD8
Kelch repeat and BTB domain containing 8.
    
 
 0.571
UBE2W
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.564
LRSAM1
Leucine rich repeat and sterile alpha motif containing 1.
      
 0.536
TMEM81
Transmembrane protein 81.
      
 0.526
EPS15
Epidermal growth factor receptor pathway substrate 15.
    
 
 0.478
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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