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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TATDN2Uncharacterized protein. (750 aa)    
Predicted Functional Partners:
PPP1R35
Protein phosphatase 1 regulatory subunit 35.
      
 0.602
PDXDC1
Pyridoxal dependent decarboxylase domain containing 1.
      
 0.601
SUPV3L1
Suv3 like RNA helicase.
      
 0.593
MGAT4B
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B.
      
 0.544
OIP5
Opa interacting protein 5.
      
 0.489
SLCO2A1
Solute carrier organic anion transporter family member.
      
 0.455
GOLT1B
Golgi transport 1B.
  
  
 0.447
YARS1
Tyrosine--tRNA ligase.
  
 
 0.430
CCDC174
Coiled-coil domain containing 174.
 
 
  
 0.428
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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