STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRNProtein tyrosine phosphatase receptor type N. (979 aa)    
Predicted Functional Partners:
PTPRN2
Protein tyrosine phosphatase receptor type N2.
  
  
0.916
DNAJB2
DnaJ heat shock protein family (Hsp40) member B2.
    
 
 0.660
PRPF40A
Pre-mRNA processing factor 40 homolog A.
    
 0.641
HPX
Amyloid beta precursor protein binding family B member 1.
   
 
 0.606
KLHL30
Kelch like family member 30.
      
 0.596
NIF3L1
NIF3-like protein 1; May function as a transcriptional corepressor through its interaction with COPS2, negatively regulating the expression of genes involved in neuronal differentiation.
      
 0.587
PDZD11
PDZ domain containing 11.
    
 0.572
IQSEC3
IQ motif and Sec7 domain 3.
   
  
 0.558
METTL8
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.547
DCLK3
Doublecortin like kinase 3.
   
 
 0.537
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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