STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMT1LtRNA methyltransferase 1 like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (726 aa)    
Predicted Functional Partners:
SWT1
SWT1 RNA endoribonuclease homolog.
   
  
 0.935
IVNS1ABP
Influenza virus NS1A binding protein.
   
  
 0.893
TPK1
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
      
 0.808
SLC6A5
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.796
FTCD
Formimidoyltransferase cyclodeaminase.
      
 0.793
BBOX1
Gamma-butyrobetaine hydroxylase 1.
      
 0.790
OPN3
Opsin 3; Belongs to the G-protein coupled receptor 1 family.
      
 0.761
RNF2
Ring finger protein 2.
      
 0.746
DAND5
DAN domain BMP antagonist family member 5.
      
 0.739
RGS7
Regulator of G protein signaling 7.
      
 0.688
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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