STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATXN1Ataxin 1. (805 aa)    
Predicted Functional Partners:
CIC
Capicua transcriptional repressor.
    
 
 0.973
ATXN1L
Ataxin 1 like.
    
0.922
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.918
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.913
PUM1
Pumilio RNA binding family member 1.
     
 0.908
ATXN3
Josephin domain-containing protein.
   
  
 0.800
ATXN7
Ataxin 7.
      
 0.720
HIKESHI
Heat shock protein nuclear import factor hikeshi.
      
 0.669
ATXN7L2
Ataxin 7 like 2.
      
 0.650
TGM6
Transglutaminase 6.
   
  
 0.648
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.