Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EMDEmerin. (260 aa)    
Predicted Functional Partners:
BANF1
Barrier to autointegration factor 1.
    
 0.996
LMNA
Lamin A/C; Belongs to the intermediate filament family.
    
 0.992
LMNB1
Lamin B1; Belongs to the intermediate filament family.
    
 0.943
LMNB2
Lamin B2; Belongs to the intermediate filament family.
    
 0.933
SYNE1
Spectrin repeat containing nuclear envelope protein 1.
    
 
 0.899
BANF2
Barrier to autointegration factor 2.
    
 0.890
LEMD3
LEM domain containing 3.
     
 0.862
RBM39
RNA binding motif protein 39.
     
 0.849
TMEM43
Transmembrane protein 43.
    
 
 0.828
SUN1
Sad1 and UNC84 domain containing 1.
    
 
 0.821
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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