Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM50AFamily with sequence similarity 50 member A. (339 aa)    
Predicted Functional Partners:
SLU7
SLU7 homolog, splicing factor.
   
 0.847
FAM32A
Family with sequence similarity 32 member A.
    
 0.828
SDE2
SDE2 telomere maintenance homolog.
    
 0.809
CDC40
Cell division cycle 40.
   
  0.791
CACTIN
Cactin, spliceosome C complex subunit.
    
 0.776
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.760
LOC101098728
Uncharacterized protein.
   
 0.747
SYF2
Uncharacterized protein.
   
 0.747
CCDC12
Coiled-coil domain containing 12.
    
 0.742
DDX41
DEAD-box helicase 41.
   
 0.738
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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