STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HELZHelicase with zinc finger. (1938 aa)    
Predicted Functional Partners:
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.821
OPTC
Opticin.
      
 0.802
RC3H2
Ring finger and CCCH-type domains 2.
   
 
 0.796
ATXN2L
Ataxin 2 like.
   
 
 0.775
MYO1F
Myosin IF; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.726
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
    
 
 0.721
PITPNC1
Phosphatidylinositol transfer protein cytoplasmic 1.
      
 0.700
GUCY2F
Guanylate cyclase.
      
 0.693
KMT2E
Lysine methyltransferase 2E.
   
 
 0.680
DEAF1
DEAF1 transcription factor.
      
 0.638
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.