STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM25RNA binding motif protein 25. (843 aa)    
Predicted Functional Partners:
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 0.990
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
 
 0.977
ENSFCAP00000058905
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
   
 
 0.969
RBM39
RNA binding motif protein 39.
   
0.963
SF3B3
Splicing factor 3b subunit 3.
    
 
 0.962
PRPF40A
Pre-mRNA processing factor 40 homolog A.
   
 0.961
PRPF40B
Pre-mRNA processing factor 40 homolog B.
   
 
 0.960
TCERG1
Transcription elongation regulator 1.
   
 
 0.951
LUC7L
LUC7 like.
   
 0.950
LOC101080269
FMC1-LUC7L2 readthrough.
   
 0.940
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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