Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SYNGR3Synaptogyrin. (229 aa)    
Predicted Functional Partners:
MAPT
Microtubule-associated protein.
   
 
 0.656
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.579
ANKRD34A
Ankyrin repeat domain 34A.
   
  
 0.576
SYP
Synaptophysin.
   
 
 0.568
SEPTIN11
Septin 11; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
      
 0.562
SH3GLB2
SH3 domain containing GRB2 like, endophilin B2.
      
 0.537
SYN3
Synapsin III.
   
  
 0.528
SYN2
Synapsin II.
   
  
 0.528
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.508
TAB1
TGF-beta activated kinase 1 (MAP3K7) binding protein 1.
 
 
    0.494
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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