STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCLRE1ADNA cross-link repair 1A. (1049 aa)    
Predicted Functional Partners:
XRCC5
X-ray repair cross complementing 5.
   
 0.810
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.795
SYMPK
Symplekin.
   
 0.775
INTS4
Integrator complex subunit 4.
   
 0.770
FIP1L1
Factor interacting with PAPOLA and CPSF1.
    
 0.759
XRCC6
X-ray repair cross complementing 6.
   
 0.755
FANCM
FA complementation group M.
   
 0.747
PCF11
PCF11 cleavage and polyadenylation factor subunit.
   
 0.719
CSTF1
Cleavage stimulation factor subunit 1.
   
 0.713
MUS81
MUS81 structure-specific endonuclease subunit.
   
 0.683
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.