STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL15A1Collagen type XV alpha 1 chain. (1372 aa)    
Predicted Functional Partners:
COL23A1
Collagen type XXIII alpha 1 chain.
  
 
0.756
PLAGL1
PLAG1 like zinc finger 1.
      
 0.644
SERPINF1
Serpin family F member 1; Belongs to the serpin family.
   
 
 0.629
MMP9
Matrix metallopeptidase 9.
   
 0.626
MMP13
Matrix metallopeptidase 13.
   
 0.620
CCDC3
Coiled-coil domain containing 3.
      
 0.606
ADCY4
Adenylate cyclase type 4; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.
      
 0.579
MAP4K3
Mitogen-activated protein kinase kinase kinase kinase 3; May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway.
      
 0.579
CTSB
Cathepsin B; Belongs to the peptidase C1 family.
     
 0.560
P3H2
Prolyl 3-hydroxylase 2.
   
 
 0.544
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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