STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLX4SLX4 structure-specific endonuclease subunit. (1742 aa)    
Predicted Functional Partners:
SLX1A
Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. Has a preference for 5'-flap structures, and promotes symmetrical cleavage of static and migrating Holliday junctions (HJs). Resolves HJs by generating two pairs of ligatable, nicked duplex products.
   
 0.998
EPRS1
Glutamyl-prolyl-tRNA synthetase.
  
 0.996
MUS81
MUS81 structure-specific endonuclease subunit.
   
 0.996
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
   
 0.992
ERCC1
ERCC excision repair 1, endonuclease non-catalytic subunit.
   
 0.981
EME1
Essential meiotic structure-specific endonuclease 1.
    
 0.977
YARS1
Tyrosine--tRNA ligase.
  
 0.925
TERF2
Telomeric repeat binding factor 2.
    
 
 0.925
FANCM
FA complementation group M.
   
 0.925
GEN1
GEN1 Holliday junction 5' flap endonuclease.
  
 0.922
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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