STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPC5Small nuclear RNA activating complex polypeptide 5. (97 aa)    
Predicted Functional Partners:
SNAPC1
Small nuclear RNA activating complex polypeptide 1.
    
 0.992
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
 0.991
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
    
 0.976
GTF2B
General transcription factor IIB.
    
 0.863
SNRPA
Small nuclear ribonucleoprotein polypeptide A.
      
 0.799
GTF2A1
General transcription factor IIA subunit 1.
    
  0.778
GTF2A2
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
  0.778
TM2D2
TM2 domain containing 2.
      
 0.734
CPSF3
Cleavage and polyadenylation specific factor 3.
      
 0.710
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
      
 0.675
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.