STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABEPKRab9 effector protein with kelch motifs. (482 aa)    
Predicted Functional Partners:
VAMP3
Vesicle associated membrane protein 3.
     
 0.934
PLIN3
Perilipin; Belongs to the perilipin family.
    
  0.837
LRFN5
Leucine rich repeat and fibronectin type III domain containing 5.
      
 0.750
MYRIP
Myosin VIIA and Rab interacting protein.
      
 0.717
DOC2A
Double C2 domain alpha.
      
 0.716
STX8
Syntaxin 8.
     
 0.656
RHBDD3
Rhomboid domain containing 3.
      
 0.612
RAB9A
RAB9A, member RAS oncogene family.
    
 0.611
RHOBTB3
Rho related BTB domain containing 3.
   
 0.592
PLIN1
Perilipin; Belongs to the perilipin family.
    
  0.562
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.