STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LUC7L3LUC7 like 3 pre-mRNA splicing factor. (472 aa)    
Predicted Functional Partners:
RBM25
RNA binding motif protein 25.
   
 0.990
PNISR
PNN interacting serine and arginine rich protein.
   
  
 0.936
PRPF40A
Pre-mRNA processing factor 40 homolog A.
   
 0.932
RBM39
RNA binding motif protein 39.
   
 0.919
SF1
Splicing factor 1.
   
 0.889
SRRT
Serrate, RNA effector molecule.
   
 0.881
PRPF39
Pre-mRNA processing factor 39.
   
 0.877
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
   
 0.876
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.874
SRRM2
Serine/arginine repetitive matrix 2.
   
 0.862
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.